Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT6AP02538 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT6AP02538 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT6AP02538 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT6AP02538 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT6AP02538 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT6AP02538 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT6AP02538 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT6AP02538 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT6AP02538 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT6AP02538 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
KRT6AP02538 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT6AP02538 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
KRT6AP02538 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT6AP02538 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
KRT6AP02538 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 AC131009.4-201ENST00000624048 1740 ntBASIC16.19■□□□□ 0.18
KRT6AP02538 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT6AP02538 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT6AP02538 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 AC092364.2-201ENST00000596710 2692 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 AC026691.1-201ENST00000602502 2017 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6AP02538 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6AP02538 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 AC073648.2-201ENST00000510116 352 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.18■□□□□ 0.18
KRT6AP02538 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.18■□□□□ 0.18
KRT6AP02538 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
KRT6AP02538 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 KRT8P39-201ENST00000396270 1433 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.18■□□□□ 0.18
KRT6AP02538 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT6AP02538 GGT3P-204ENST00000453783 1664 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 AL513523.2-202ENST00000427283 2040 ntBASIC16.18■□□□□ 0.18
KRT6AP02538 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
KRT6AP02538 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
KRT6AP02538 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
KRT6AP02538 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
KRT6AP02538 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms