Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HLA-DQA2P01906 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 AL139288.1-201ENST00000623748 933 ntBASIC15.04■□□□□ -0
HLA-DQA2P01906 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HLA-DQA2P01906 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DQA2P01906 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DQA2P01906 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.04■□□□□ -0
HLA-DQA2P01906 AC006449.5-201ENST00000610658 2098 ntBASIC15.04■□□□□ -0
HLA-DQA2P01906 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HLA-DQA2P01906 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HLA-DQA2P01906 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.03■□□□□ -0
HLA-DQA2P01906 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 KRT8P49-201ENST00000604166 1432 ntBASIC15.03■□□□□ -0
HLA-DQA2P01906 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 PRYP5-201ENST00000451909 266 ntBASIC15.03■□□□□ -0
HLA-DQA2P01906 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 AL353135.1-201ENST00000606729 504 ntBASIC15.03■□□□□ -0
HLA-DQA2P01906 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.03■□□□□ -0
HLA-DQA2P01906 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.03■□□□□ -0
HLA-DQA2P01906 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DQA2P01906 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.03■□□□□ -0
HLA-DQA2P01906 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQA2P01906 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA2P01906 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQA2P01906 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DQA2P01906 PRELID1P1-202ENST00000567272 903 ntBASIC15.02■□□□□ -0
HLA-DQA2P01906 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DQA2P01906 LINC01711-201ENST00000598340 967 ntBASIC15.02■□□□□ -0
HLA-DQA2P01906 TERC-201ENST00000602385 541 ntBASIC15.02■□□□□ -0
HLA-DQA2P01906 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DQA2P01906 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DQA2P01906 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.02□□□□□ -0.01
HLA-DQA2P01906 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms