Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CNOT4O95628 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC109635.5-201ENST00000533593 962 ntBASIC14.84□□□□□ -0.03
CNOT4O95628 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC013467.2-201ENST00000605472 835 ntBASIC14.84□□□□□ -0.03
CNOT4O95628 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC063926.3-201ENST00000624734 5658 ntBASIC14.84□□□□□ -0.03
CNOT4O95628 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.84□□□□□ -0.03
CNOT4O95628 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.84□□□□□ -0.03
CNOT4O95628 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNOT4O95628 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CNOT4O95628 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.83□□□□□ -0.03
CNOT4O95628 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.83□□□□□ -0.03
CNOT4O95628 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CNOT4O95628 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNOT4O95628 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.83□□□□□ -0.03
CNOT4O95628 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CNOT4O95628 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT4O95628 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT4O95628 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT4O95628 PMS2P4-201ENST00000412466 1052 ntBASIC14.83□□□□□ -0.04
CNOT4O95628 HTR5BP-201ENST00000430851 1154 ntBASIC14.83□□□□□ -0.04
CNOT4O95628 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 AP002472.1-201ENST00000577490 586 ntBASIC14.83□□□□□ -0.04
CNOT4O95628 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT4O95628 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT4O95628 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 AL121761.2-201ENST00000598007 1648 ntBASIC14.83□□□□□ -0.04
CNOT4O95628 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CNOT4O95628 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT4O95628 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT4O95628 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT4O95628 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT4O95628 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 AD000864.1-201ENST00000624076 2295 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 AC080080.1-201ENST00000625121 2420 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CNOT4O95628 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT4O95628 HMGA1P7-201ENST00000406908 502 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CNOT4O95628 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.82□□□□□ -0.04
CNOT4O95628 ALG1L5P-201ENST00000482043 771 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.82□□□□□ -0.04
CNOT4O95628 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 MIR4492-201ENST00000581627 80 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT4O95628 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 AL161645.1-201ENST00000622716 1255 ntBASIC14.82□□□□□ -0.04
CNOT4O95628 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT4O95628 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms