Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NKX2-2O95096 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.36■□□□□ 0.05
NKX2-2O95096 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.36■□□□□ 0.05
NKX2-2O95096 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NKX2-2O95096 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX2-2O95096 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 AC092474.2-201ENST00000424288 719 ntBASIC15.35■□□□□ 0.05
NKX2-2O95096 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.35■□□□□ 0.05
NKX2-2O95096 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.35■□□□□ 0.05
NKX2-2O95096 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 MTHFR-217ENST00000641820 1569 ntBASIC15.35■□□□□ 0.05
NKX2-2O95096 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.35■□□□□ 0.05
NKX2-2O95096 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.35■□□□□ 0.05
NKX2-2O95096 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 AL662844.4-201ENST00000606367 2838 ntBASIC15.35■□□□□ 0.05
NKX2-2O95096 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NKX2-2O95096 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NKX2-2O95096 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.34■□□□□ 0.05
NKX2-2O95096 AC074386.1-202ENST00000463561 864 ntBASIC15.34■□□□□ 0.05
NKX2-2O95096 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.34■□□□□ 0.05
NKX2-2O95096 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.34■□□□□ 0.05
NKX2-2O95096 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 AC068137.2-201ENST00000605408 478 ntBASIC15.34■□□□□ 0.05
NKX2-2O95096 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.34■□□□□ 0.05
NKX2-2O95096 AL513190.1-201ENST00000621254 727 ntBASIC15.34■□□□□ 0.05
NKX2-2O95096 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.34■□□□□ 0.05
NKX2-2O95096 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 AC092364.2-201ENST00000596710 2692 ntBASIC15.34■□□□□ 0.05
NKX2-2O95096 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NKX2-2O95096 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NKX2-2O95096 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NKX2-2O95096 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms