Protein–RNA interactions for Protein: O75335

PPFIA4, Liprin-alpha-4, humanhuman

Predictions only

Length 1,185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4O75335 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 RNU1-129P-201ENST00000384064 167 ntBASIC18.84■□□□□ 0.61
PPFIA4O75335 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.84■□□□□ 0.61
PPFIA4O75335 KRT18P32-201ENST00000424695 1287 ntBASIC18.84■□□□□ 0.61
PPFIA4O75335 AC067863.1-201ENST00000494933 530 ntBASIC18.84■□□□□ 0.61
PPFIA4O75335 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.84■□□□□ 0.61
PPFIA4O75335 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.84■□□□□ 0.61
PPFIA4O75335 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.84■□□□□ 0.61
PPFIA4O75335 U1.21-201ENST00000580816 167 ntBASIC18.84■□□□□ 0.61
PPFIA4O75335 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PPFIA4O75335 AL096865.1-201ENST00000606796 927 ntBASIC18.84■□□□□ 0.61
PPFIA4O75335 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.84■□□□□ 0.61
PPFIA4O75335 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PPFIA4O75335 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PPFIA4O75335 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PPFIA4O75335 WASH6P-202ENST00000359512 1437 ntBASIC18.83■□□□□ 0.61
PPFIA4O75335 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PPFIA4O75335 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PPFIA4O75335 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PPFIA4O75335 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.83■□□□□ 0.61
PPFIA4O75335 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
PPFIA4O75335 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PPFIA4O75335 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.83■□□□□ 0.6
PPFIA4O75335 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.83■□□□□ 0.6
PPFIA4O75335 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.83■□□□□ 0.6
PPFIA4O75335 IGHV3-62-201ENST00000520057 340 ntBASIC18.83■□□□□ 0.6
PPFIA4O75335 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.83■□□□□ 0.6
PPFIA4O75335 MPDU1-223ENST00000582151 728 ntBASIC18.83■□□□□ 0.6
PPFIA4O75335 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.83■□□□□ 0.6
PPFIA4O75335 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.83■□□□□ 0.6
PPFIA4O75335 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 AP001059.3-201ENST00000619053 235 ntBASIC18.83■□□□□ 0.6
PPFIA4O75335 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.83■□□□□ 0.6
PPFIA4O75335 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
PPFIA4O75335 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.83■□□□□ 0.6
PPFIA4O75335 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PPFIA4O75335 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PPFIA4O75335 AL021920.2-201ENST00000624828 1351 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 AL023806.1-201ENST00000603994 1649 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 PCDHB19P-201ENST00000570871 2371 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PPFIA4O75335 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PPFIA4O75335 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.82■□□□□ 0.6
PPFIA4O75335 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.82■□□□□ 0.6
PPFIA4O75335 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.82■□□□□ 0.6
PPFIA4O75335 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PPFIA4O75335 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.82■□□□□ 0.6
PPFIA4O75335 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 Z92544.3-201ENST00000624747 417 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 FRMD8P1-201ENST00000440433 1524 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PPFIA4O75335 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.82■□□□□ 0.6
PPFIA4O75335 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.82■□□□□ 0.6
PPFIA4O75335 AC131009.4-201ENST00000624048 1740 ntBASIC18.82■□□□□ 0.6
PPFIA4O75335 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.82■□□□□ 0.6
PPFIA4O75335 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PPFIA4O75335 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.82■□□□□ 0.6
PPFIA4O75335 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PPFIA4O75335 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.81■□□□□ 0.6
PPFIA4O75335 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PPFIA4O75335 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PPFIA4O75335 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.81■□□□□ 0.6
PPFIA4O75335 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PPFIA4O75335 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PPFIA4O75335 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PPFIA4O75335 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.81■□□□□ 0.6
PPFIA4O75335 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PPFIA4O75335 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PPFIA4O75335 GPS2P2-201ENST00000430745 888 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms