Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 RN7SL589P-201ENST00000481268 310 ntBASIC16.86■□□□□ 0.29
PRAMEF11O60813 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 AC026120.1-201ENST00000611536 926 ntBASIC16.86■□□□□ 0.29
PRAMEF11O60813 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 LINC01144-201ENST00000626198 1710 ntBASIC16.86■□□□□ 0.29
PRAMEF11O60813 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 ALOX12P2-203ENST00000570921 1945 ntBASIC16.86■□□□□ 0.29
PRAMEF11O60813 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRAMEF11O60813 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.86■□□□□ 0.29
PRAMEF11O60813 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 KRT8P48-201ENST00000515599 1220 ntBASIC16.85■□□□□ 0.29
PRAMEF11O60813 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AC243562.1-201ENST00000560672 389 ntBASIC16.85■□□□□ 0.29
PRAMEF11O60813 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AC055717.3-201ENST00000622967 595 ntBASIC16.85■□□□□ 0.29
PRAMEF11O60813 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PRAMEF11O60813 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRAMEF11O60813 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 ME2P1-201ENST00000426028 1970 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PRAMEF11O60813 MIR1233-2-201ENST00000408138 82 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 MIR1233-1-201ENST00000408722 82 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 AC211486.1-202ENST00000416371 468 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 SPDYE11-202ENST00000450699 704 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 AC211476.1-201ENST00000503899 468 ntBASIC16.84■□□□□ 0.29
PRAMEF11O60813 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.84■□□□□ 0.29
PRAMEF11O60813 SPDYE9P-201ENST00000570642 692 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms