Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.65■□□□□ 0.1
HCN1O60741 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HCN1O60741 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HCN1O60741 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
HCN1O60741 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 CRYGEP-201ENST00000412192 528 ntBASIC15.64■□□□□ 0.09
HCN1O60741 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 AC007967.2-201ENST00000432613 625 ntBASIC15.64■□□□□ 0.09
HCN1O60741 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.64■□□□□ 0.09
HCN1O60741 AC108073.2-201ENST00000464002 357 ntBASIC15.64■□□□□ 0.09
HCN1O60741 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.64■□□□□ 0.09
HCN1O60741 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.64■□□□□ 0.09
HCN1O60741 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.64■□□□□ 0.09
HCN1O60741 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 AC064836.3-201ENST00000607928 673 ntBASIC15.64■□□□□ 0.09
HCN1O60741 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.64■□□□□ 0.09
HCN1O60741 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
HCN1O60741 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.64■□□□□ 0.09
HCN1O60741 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HCN1O60741 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.63■□□□□ 0.09
HCN1O60741 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.63■□□□□ 0.09
HCN1O60741 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.63■□□□□ 0.09
HCN1O60741 MIR1233-2-201ENST00000408138 82 ntBASIC15.63■□□□□ 0.09
HCN1O60741 MIR1233-1-201ENST00000408722 82 ntBASIC15.63■□□□□ 0.09
HCN1O60741 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.63■□□□□ 0.09
HCN1O60741 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.63■□□□□ 0.09
HCN1O60741 DNAJB3-201ENST00000446806 729 ntBASIC15.63■□□□□ 0.09
HCN1O60741 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.63■□□□□ 0.09
HCN1O60741 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.63■□□□□ 0.09
HCN1O60741 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.63■□□□□ 0.09
HCN1O60741 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.63■□□□□ 0.09
HCN1O60741 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
HCN1O60741 AC139530.3-201ENST00000620344 690 ntBASIC15.63■□□□□ 0.09
HCN1O60741 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 AL135999.2-201ENST00000622438 1686 ntBASIC15.63■□□□□ 0.09
HCN1O60741 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.63■□□□□ 0.09
HCN1O60741 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HCN1O60741 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.62■□□□□ 0.09
HCN1O60741 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.62■□□□□ 0.09
HCN1O60741 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.62■□□□□ 0.09
HCN1O60741 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HCN1O60741 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms