Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 SPDYE14P-201ENST00000442619 822 ntBASIC16.54■□□□□ 0.24
PCDHGA12O60330 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 AL158211.3-201ENST00000607385 239 ntBASIC16.54■□□□□ 0.24
PCDHGA12O60330 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 UXT-AS1-201ENST00000590504 1525 ntBASIC16.54■□□□□ 0.24
PCDHGA12O60330 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA12O60330 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 CROCCP2-202ENST00000412962 2773 ntBASIC16.54■□□□□ 0.24
PCDHGA12O60330 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA12O60330 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 AC008677.1-201ENST00000519230 1561 ntBASIC16.53■□□□□ 0.24
PCDHGA12O60330 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 AC005225.4-201ENST00000557330 545 ntBASIC16.53■□□□□ 0.24
PCDHGA12O60330 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 AC012645.4-201ENST00000610691 1061 ntBASIC16.53■□□□□ 0.24
PCDHGA12O60330 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA12O60330 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA12O60330 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 FO538757.1-201ENST00000623083 1397 ntBASIC16.52■□□□□ 0.24
PCDHGA12O60330 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 AL138688.1-201ENST00000624851 1594 ntBASIC16.52■□□□□ 0.24
PCDHGA12O60330 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA12O60330 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PCDHGA12O60330 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms