Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ABCC4O15439 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ABCC4O15439 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ABCC4O15439 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ABCC4O15439 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.09■□□□□ 0.97
ABCC4O15439 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ABCC4O15439 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCC4O15439 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
ABCC4O15439 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCC4O15439 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCC4O15439 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.08■□□□□ 0.97
ABCC4O15439 SPCS2P4-201ENST00000436160 681 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 CNN2P2-201ENST00000443536 909 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 CNN2P3-201ENST00000450201 906 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ABCC4O15439 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 AC138761.1-201ENST00000584393 385 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.08■□□□□ 0.97
ABCC4O15439 AL136317.3-201ENST00000618497 906 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 AC005052.1-201ENST00000625181 2492 ntBASIC21.08■□□□□ 0.97
ABCC4O15439 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ABCC4O15439 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.08■□□□□ 0.97
ABCC4O15439 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
ABCC4O15439 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ABCC4O15439 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ABCC4O15439 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
ABCC4O15439 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 AKAP8P1-201ENST00000434743 1349 ntBASIC21.07■□□□□ 0.96
ABCC4O15439 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCC4O15439 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCC4O15439 AC069262.1-201ENST00000539058 672 ntBASIC21.07■□□□□ 0.96
ABCC4O15439 AL512356.2-201ENST00000546955 174 ntBASIC21.07■□□□□ 0.96
ABCC4O15439 AP001059.3-201ENST00000619053 235 ntBASIC21.07■□□□□ 0.96
ABCC4O15439 AJ011932.1-201ENST00000621707 465 ntBASIC21.07■□□□□ 0.96
ABCC4O15439 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
ABCC4O15439 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
ABCC4O15439 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ABCC4O15439 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ABCC4O15439 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.07■□□□□ 0.96
ABCC4O15439 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.07■□□□□ 0.96
ABCC4O15439 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.06■□□□□ 0.96
ABCC4O15439 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ABCC4O15439 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.06■□□□□ 0.96
ABCC4O15439 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ABCC4O15439 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.06■□□□□ 0.96
ABCC4O15439 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.06■□□□□ 0.96
ABCC4O15439 AC124067.4-201ENST00000519691 2379 ntBASIC21.06■□□□□ 0.96
ABCC4O15439 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms