Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NFKBIEO00221 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
NFKBIEO00221 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NFKBIEO00221 AL158212.4-201ENST00000624062 1286 ntBASIC19.8■□□□□ 0.76
NFKBIEO00221 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NFKBIEO00221 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NFKBIEO00221 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.8■□□□□ 0.76
NFKBIEO00221 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.79■□□□□ 0.76
NFKBIEO00221 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.79■□□□□ 0.76
NFKBIEO00221 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 AC133539.2-201ENST00000604757 467 ntBASIC19.79■□□□□ 0.76
NFKBIEO00221 LINC01115-203ENST00000606068 577 ntBASIC19.79■□□□□ 0.76
NFKBIEO00221 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NFKBIEO00221 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.79■□□□□ 0.76
NFKBIEO00221 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NFKBIEO00221 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NFKBIEO00221 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.78■□□□□ 0.76
NFKBIEO00221 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NFKBIEO00221 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.78■□□□□ 0.76
NFKBIEO00221 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKBIEO00221 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.78■□□□□ 0.76
NFKBIEO00221 AP001889.1-201ENST00000525414 633 ntBASIC19.78■□□□□ 0.76
NFKBIEO00221 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.78■□□□□ 0.76
NFKBIEO00221 AC124947.2-201ENST00000547118 1133 ntBASIC19.78■□□□□ 0.76
NFKBIEO00221 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NFKBIEO00221 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.78■□□□□ 0.76
NFKBIEO00221 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC19.78■□□□□ 0.76
NFKBIEO00221 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.78■□□□□ 0.76
NFKBIEO00221 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKBIEO00221 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.78■□□□□ 0.76
NFKBIEO00221 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.78■□□□□ 0.76
NFKBIEO00221 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.78■□□□□ 0.76
NFKBIEO00221 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NFKBIEO00221 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 TP73-213ENST00000604479 1623 ntTSL 5 BASIC19.77■□□□□ 0.76
NFKBIEO00221 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.77■□□□□ 0.76
NFKBIEO00221 FO393414.2-201ENST00000405153 598 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.77■□□□□ 0.76
NFKBIEO00221 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.77■□□□□ 0.76
NFKBIEO00221 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.77■□□□□ 0.76
NFKBIEO00221 AL359711.2-201ENST00000563105 872 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 AC036164.1-201ENST00000570544 333 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.77■□□□□ 0.76
NFKBIEO00221 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.77■□□□□ 0.76
NFKBIEO00221 AC009542.2-202ENST00000619004 1067 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.77■□□□□ 0.76
NFKBIEO00221 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NFKBIEO00221 AL354751.1-201ENST00000412768 1863 ntBASIC19.77■□□□□ 0.76
NFKBIEO00221 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms