Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TLR4O00206 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR4O00206 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR4O00206 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TLR4O00206 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR4O00206 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR4O00206 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 TSPY16P-201ENST00000449843 468 ntBASIC16.49■□□□□ 0.23
TLR4O00206 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR4O00206 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR4O00206 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.49■□□□□ 0.23
TLR4O00206 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 AP001094.4-201ENST00000579008 2176 ntBASIC16.49■□□□□ 0.23
TLR4O00206 CYP2A7P1-201ENST00000595391 815 ntBASIC16.49■□□□□ 0.23
TLR4O00206 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.49■□□□□ 0.23
TLR4O00206 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 AC021097.1-201ENST00000607902 574 ntBASIC16.49■□□□□ 0.23
TLR4O00206 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.49■□□□□ 0.23
TLR4O00206 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 AC022211.2-201ENST00000585075 2527 ntBASIC16.49■□□□□ 0.23
TLR4O00206 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TLR4O00206 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR4O00206 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
TLR4O00206 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.48■□□□□ 0.23
TLR4O00206 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TLR4O00206 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR4O00206 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 AC069120.2-201ENST00000524091 540 ntBASIC16.48■□□□□ 0.23
TLR4O00206 AL138918.1-201ENST00000568306 659 ntBASIC16.48■□□□□ 0.23
TLR4O00206 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR4O00206 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR4O00206 AC239800.4-201ENST00000603712 296 ntBASIC16.48■□□□□ 0.23
TLR4O00206 AL158211.3-201ENST00000607385 239 ntBASIC16.48■□□□□ 0.23
TLR4O00206 AL390754.1-201ENST00000619088 582 ntBASIC16.48■□□□□ 0.23
TLR4O00206 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TLR4O00206 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR4O00206 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TLR4O00206 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR4O00206 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms