Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 PCGF3-213ENST00000620529 1899 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 AC004870.1-201ENST00000315132 882 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
AP3B1O00203 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 PRSS29P-201ENST00000440800 595 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.86■□□□□ 0.29
AP3B1O00203 UNC93B7-201ENST00000509439 705 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 AC010654.1-201ENST00000615722 808 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.86■□□□□ 0.29
AP3B1O00203 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.86■□□□□ 0.29
AP3B1O00203 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
AP3B1O00203 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.86■□□□□ 0.29
AP3B1O00203 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 AC012569.1-201ENST00000591191 1524 ntBASIC16.86■□□□□ 0.29
AP3B1O00203 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3B1O00203 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3B1O00203 EMBP1-201ENST00000458200 901 ntBASIC16.85■□□□□ 0.29
AP3B1O00203 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.85■□□□□ 0.29
AP3B1O00203 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
AP3B1O00203 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
AP3B1O00203 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 AL513477.1-201ENST00000602865 2407 ntBASIC16.85■□□□□ 0.29
AP3B1O00203 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
AP3B1O00203 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
AP3B1O00203 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
AP3B1O00203 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
AP3B1O00203 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
AP3B1O00203 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
AP3B1O00203 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms