Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 FAM21FP-201ENST00000426241 1131 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AC006033.1-201ENST00000440505 426 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AC015967.2-201ENST00000624092 234 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AC006435.4-201ENST00000625037 234 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AL356737.1-201ENST00000634391 234 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AC108860.2-201ENST00000562760 2183 ntBASIC17.13■□□□□ 0.33
XIRP2A4UGR9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
XIRP2A4UGR9 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 DUX4L45-201ENST00000566406 1057 ntBASIC17.12■□□□□ 0.33
XIRP2A4UGR9 AC061975.2-201ENST00000581722 295 ntBASIC17.12■□□□□ 0.33
XIRP2A4UGR9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 KRT43P-201ENST00000434019 910 ntBASIC17.12■□□□□ 0.33
XIRP2A4UGR9 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 AC128714.1-201ENST00000637035 887 ntBASIC17.12■□□□□ 0.33
XIRP2A4UGR9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 BICD1-207ENST00000551848 1962 ntBASIC17.12■□□□□ 0.33
XIRP2A4UGR9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
XIRP2A4UGR9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AC092053.1-201ENST00000605787 1936 ntBASIC17.11■□□□□ 0.33
XIRP2A4UGR9 EGFEM1P-202ENST00000431685 1563 ntBASIC17.11■□□□□ 0.33
XIRP2A4UGR9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
XIRP2A4UGR9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
XIRP2A4UGR9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms