Protein–RNA interactions for Protein: A2A288

ZC3H12D, Probable ribonuclease ZC3H12D, humanhuman

Known RBP Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H12DA2A288 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ZC3H12DA2A288 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 TOP3BP1-201ENST00000420768 1380 ntBASIC15.27■□□□□ 0.04
ZC3H12DA2A288 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 AC107918.2-201ENST00000530817 355 ntBASIC15.27■□□□□ 0.04
ZC3H12DA2A288 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 AL662844.1-201ENST00000546340 181 ntBASIC15.27■□□□□ 0.04
ZC3H12DA2A288 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 GGTLC5P-201ENST00000617623 998 ntBASIC15.27■□□□□ 0.04
ZC3H12DA2A288 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.27■□□□□ 0.04
ZC3H12DA2A288 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 AC007950.2-201ENST00000615045 2347 ntBASIC15.27■□□□□ 0.03
ZC3H12DA2A288 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ZC3H12DA2A288 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
ZC3H12DA2A288 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 OR7E47P-204ENST00000575924 449 ntBASIC15.26■□□□□ 0.03
ZC3H12DA2A288 AC004790.2-201ENST00000623588 572 ntBASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.26■□□□□ 0.03
ZC3H12DA2A288 PGM5P2-202ENST00000637225 1043 ntBASIC15.26■□□□□ 0.03
ZC3H12DA2A288 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ZC3H12DA2A288 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms