Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRGV1A0A0A0MS02 AC092171.3-201ENST00000610122 2651 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AL645728.1-201ENST00000366221 2101 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AL450487.1-201ENST00000426799 995 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AC136632.2-201ENST00000512891 861 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AL805961.1-202ENST00000641562 540 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AF228730.7-201ENST00000641842 219 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AC124067.4-201ENST00000519691 2379 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AL118508.1-201ENST00000613502 2345 ntBASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TRGV1A0A0A0MS02 AL603756.1-201ENST00000606511 2163 ntBASIC12.15□□□□□ -0.47
TRGV1A0A0A0MS02 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV1A0A0A0MS02 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV1A0A0A0MS02 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV1A0A0A0MS02 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
TRGV1A0A0A0MS02 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 KRT18P67-201ENST00000432816 1264 ntBASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 AC087163.2-201ENST00000457299 853 ntBASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 RPS15P9-201ENST00000494093 319 ntBASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 RN7SL510P-201ENST00000581311 263 ntBASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TP73-AS1-207ENST00000624167 988 ntBASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRGV1A0A0A0MS02 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms