Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 SPDYE15P-201ENST00000424157 909 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 HCG4P8-203ENST00000443049 980 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AL359075.1-203ENST00000462729 1002 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AL441883.1-201ENST00000566170 1045 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 STK25P1-201ENST00000585406 838 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 AL121956.5-201ENST00000625261 221 ntBASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGB1Q9Y5G3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AL049757.1-201ENST00000616842 1596 ntBASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 FAM86EP-206ENST00000510506 987 ntBASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AL390719.2-201ENST00000606993 987 ntBASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDHGB1Q9Y5G3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB1Q9Y5G3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB1Q9Y5G3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB1Q9Y5G3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHGB1Q9Y5G3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHGB1Q9Y5G3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 AC011558.1-201ENST00000623459 338 ntBASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 AC068587.6-202ENST00000641839 5619 ntBASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGB1Q9Y5G3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms