Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 AC013467.2-201ENST00000605472 835 ntBASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 AC073592.8-201ENST00000624126 511 ntBASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRG3Q9Y2Y8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PRG3Q9Y2Y8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AC027369.6-201ENST00000525520 931 ntBASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 SNX33P1-201ENST00000592116 1762 ntBASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AC139713.2-201ENST00000641328 2723 ntBASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 AL023806.1-201ENST00000603994 1649 ntBASIC17.76■□□□□ 0.43
PRG3Q9Y2Y8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 HLA-H-201ENST00000383620 1096 ntBASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 SPDYE12P-201ENST00000618416 771 ntBASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRG3Q9Y2Y8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRG3Q9Y2Y8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PRG3Q9Y2Y8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRG3Q9Y2Y8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PRG3Q9Y2Y8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRG3Q9Y2Y8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms