Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 FAM58DP-201ENST00000428076 619 ntBASIC15.69■□□□□ 0.1
CTSFQ9UBX1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 HLA-J-203ENST00000494367 1087 ntBASIC15.69■□□□□ 0.1
CTSFQ9UBX1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AC013467.2-201ENST00000605472 835 ntBASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CTSFQ9UBX1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 UXT-AS1-201ENST00000590504 1525 ntBASIC15.68■□□□□ 0.1
CTSFQ9UBX1 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 HMGN1P19-201ENST00000436976 333 ntBASIC15.68■□□□□ 0.1
CTSFQ9UBX1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 LINC01225-203ENST00000563550 1244 ntBASIC15.68■□□□□ 0.1
CTSFQ9UBX1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CTSFQ9UBX1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AL391256.1-201ENST00000443260 1855 ntBASIC15.67■□□□□ 0.1
CTSFQ9UBX1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 SNX33P1-201ENST00000592116 1762 ntBASIC15.67■□□□□ 0.1
CTSFQ9UBX1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AL645728.1-201ENST00000366221 2101 ntBASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSFQ9UBX1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms