Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.89■□□□□ 0.45
CNTN3Q9P232 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 AL031731.1-201ENST00000642131 2094 ntBASIC17.89■□□□□ 0.45
CNTN3Q9P232 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 AC073439.1-201ENST00000624121 1774 ntBASIC17.89■□□□□ 0.45
CNTN3Q9P232 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNTN3Q9P232 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.88■□□□□ 0.45
CNTN3Q9P232 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AC078925.2-201ENST00000624013 1973 ntBASIC17.88■□□□□ 0.45
CNTN3Q9P232 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AC026150.2-201ENST00000564693 1156 ntBASIC17.88■□□□□ 0.45
CNTN3Q9P232 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 GGT4P-201ENST00000623672 1708 ntBASIC17.88■□□□□ 0.45
CNTN3Q9P232 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.88■□□□□ 0.45
CNTN3Q9P232 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNTN3Q9P232 FOXO1B-201ENST00000504678 1527 ntBASIC17.88■□□□□ 0.45
CNTN3Q9P232 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 GPAA1P2-202ENST00000606848 1787 ntBASIC17.87■□□□□ 0.45
CNTN3Q9P232 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 ALG1L8P-201ENST00000533887 760 ntBASIC17.87■□□□□ 0.45
CNTN3Q9P232 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 AC106028.4-201ENST00000614509 607 ntBASIC17.87■□□□□ 0.45
CNTN3Q9P232 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 Z92544.3-201ENST00000624747 417 ntBASIC17.87■□□□□ 0.45
CNTN3Q9P232 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNTN3Q9P232 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.87■□□□□ 0.45
CNTN3Q9P232 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 RNF216P1-203ENST00000404404 2427 ntBASIC17.86■□□□□ 0.45
CNTN3Q9P232 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.86■□□□□ 0.45
CNTN3Q9P232 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNTN3Q9P232 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.86■□□□□ 0.45
CNTN3Q9P232 AC069262.1-201ENST00000539058 672 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms