Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 AC061975.2-201ENST00000581722 295 ntBASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CXXC1Q9P0U4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 AC018665.1-201ENST00000622927 1362 ntBASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 AC092337.1-201ENST00000568699 1129 ntBASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 MIR6069-201ENST00000620069 79 ntBASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 CLK3P2-201ENST00000427566 1453 ntBASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CXXC1Q9P0U4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SNX33P1-201ENST00000592116 1762 ntBASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 RRP7BP-205ENST00000566851 833 ntBASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 AC006277.1-201ENST00000624348 1610 ntBASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.67■□□□□ 0.42
CXXC1Q9P0U4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms