Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 MPDU1-223ENST00000582151 728 ntBASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AL353135.1-201ENST00000606729 504 ntBASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 AC010654.1-201ENST00000615722 808 ntBASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.16■□□□□ 0.66
LMBRD1Q9NUN5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 LINC01144-201ENST00000626198 1710 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 KRT18P57-201ENST00000443599 1254 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AC092647.4-201ENST00000457211 535 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 BNIP3P18-201ENST00000593976 575 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AC073592.4-201ENST00000623827 446 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AC097493.4-201ENST00000641197 219 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 AC023157.3-201ENST00000619086 2088 ntBASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.15■□□□□ 0.66
LMBRD1Q9NUN5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.14■□□□□ 0.66
LMBRD1Q9NUN5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 AL671277.2-201ENST00000458060 996 ntBASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.14■□□□□ 0.65
LMBRD1Q9NUN5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms