Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.69■□□□□ 0.26
MRM3Q9HC36 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRM3Q9HC36 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRM3Q9HC36 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MRM3Q9HC36 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MRM3Q9HC36 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 VN2R19P-201ENST00000442399 1052 ntBASIC16.68■□□□□ 0.26
MRM3Q9HC36 AC009947.1-201ENST00000444350 727 ntBASIC16.68■□□□□ 0.26
MRM3Q9HC36 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 AC079776.4-201ENST00000511039 504 ntBASIC16.68■□□□□ 0.26
MRM3Q9HC36 UNC93B6-202ENST00000528242 690 ntBASIC16.68■□□□□ 0.26
MRM3Q9HC36 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
MRM3Q9HC36 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MRM3Q9HC36 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 RNU1-129P-201ENST00000384064 167 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 HMGA1P7-201ENST00000406908 502 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 IGHV3-22-201ENST00000520721 359 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 AL031432.2-201ENST00000566714 459 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 AL928711.1-201ENST00000570165 459 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 U1.21-201ENST00000580816 167 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 AC021097.1-201ENST00000607902 574 ntBASIC16.67■□□□□ 0.26
MRM3Q9HC36 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MRM3Q9HC36 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MRM3Q9HC36 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms