Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LRTM1Q9HBL6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AKR1C7P-201ENST00000305623 895 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 LAGE3P1-201ENST00000425356 484 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SAPCD2P3-201ENST00000455031 850 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SLC25A6P2-201ENST00000497974 877 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AC021087.4-201ENST00000563761 564 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AC006557.2-201ENST00000592985 1240 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 AC131009.4-201ENST00000624048 1740 ntBASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.08■□□□□ 0.16
LRTM1Q9HBL6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AL031731.1-201ENST00000642131 2094 ntBASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 KRT126P-201ENST00000549467 1181 ntBASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRTM1Q9HBL6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 AC022188.1-201ENST00000620960 1664 ntBASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRTM1Q9HBL6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms