Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AP002414.1-201ENST00000391405 1147 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AL020989.1-201ENST00000422979 469 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 NUS1P1-201ENST00000446295 882 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AC011498.5-201ENST00000592027 486 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AC013467.2-201ENST00000605472 835 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AC006277.1-201ENST00000624348 1610 ntBASIC20.55■□□□□ 0.88
UPF2Q9HAU5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPF2Q9HAU5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 AC002310.6-201ENST00000624451 1377 ntBASIC20.54■□□□□ 0.88
UPF2Q9HAU5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.54■□□□□ 0.88
UPF2Q9HAU5 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC20.54■□□□□ 0.88
UPF2Q9HAU5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 AC005521.1-201ENST00000393351 872 ntBASIC20.53■□□□□ 0.88
UPF2Q9HAU5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 KRT8P26-201ENST00000534154 1276 ntBASIC20.53■□□□□ 0.88
UPF2Q9HAU5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 AC007326.2-201ENST00000624224 7579 ntBASIC20.53■□□□□ 0.88
UPF2Q9HAU5 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPF2Q9HAU5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC20.52■□□□□ 0.88
UPF2Q9HAU5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms