Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 MIR658-201ENST00000385210 100 ntBASIC18.11■□□□□ 0.49
HIPK3Q9H422 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 AL512361.1-201ENST00000554200 418 ntBASIC18.11■□□□□ 0.49
HIPK3Q9H422 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 AC106886.1-201ENST00000568660 600 ntBASIC18.11■□□□□ 0.49
HIPK3Q9H422 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.11■□□□□ 0.49
HIPK3Q9H422 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 AL023806.1-201ENST00000603994 1649 ntBASIC18.11■□□□□ 0.49
HIPK3Q9H422 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.11■□□□□ 0.49
HIPK3Q9H422 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HIPK3Q9H422 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AC116353.5-201ENST00000638148 1699 ntBASIC18.1■□□□□ 0.49
HIPK3Q9H422 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AC044860.1-202ENST00000559481 777 ntBASIC18.1■□□□□ 0.49
HIPK3Q9H422 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HIPK3Q9H422 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.1■□□□□ 0.49
HIPK3Q9H422 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 SPDYE18-201ENST00000510091 1050 ntBASIC18.09■□□□□ 0.49
HIPK3Q9H422 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HIPK3Q9H422 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HIPK3Q9H422 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HIPK3Q9H422 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.08■□□□□ 0.49
HIPK3Q9H422 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HIPK3Q9H422 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms