Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 AC006504.4-201ENST00000592118 1568 ntBASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 AL603756.1-201ENST00000606511 2163 ntBASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC68Q9H2F9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RPS2P28-201ENST00000314255 741 ntBASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 AC087163.2-201ENST00000457299 853 ntBASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 UNC93B7-201ENST00000509439 705 ntBASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 GGTLC5P-201ENST00000617623 998 ntBASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC68Q9H2F9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 AC004870.1-201ENST00000315132 882 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 FAM197Y8-203ENST00000450145 560 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 EMBP1-201ENST00000458200 901 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 RNPS1P1-201ENST00000507437 918 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 AC136632.2-201ENST00000512891 861 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 AL121912.1-201ENST00000603683 238 ntBASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC68Q9H2F9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms