Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 AC084018.2-201ENST00000613093 2607 ntBASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 GGT4P-201ENST00000623672 1708 ntBASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
POLR1EQ9GZS1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 GPAA1P2-202ENST00000606848 1787 ntBASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
POLR1EQ9GZS1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 GGT3P-204ENST00000453783 1664 ntBASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
POLR1EQ9GZS1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC092919.2-201ENST00000623631 1645 ntBASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC002056.1-201ENST00000395613 760 ntBASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC004832.2-201ENST00000426397 482 ntBASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC112191.1-201ENST00000523689 701 ntBASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.88■□□□□ 0.29
POLR1EQ9GZS1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
POLR1EQ9GZS1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR1EQ9GZS1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR1EQ9GZS1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
POLR1EQ9GZS1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms