Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 AC104692.2-201ENST00000603054 253 ntBASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
UPF3BQ9BZI7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC012640.2-201ENST00000561606 901 ntBASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AL031731.1-201ENST00000642131 2094 ntBASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 GGT3P-204ENST00000453783 1664 ntBASIC19.94■□□□□ 0.78
UPF3BQ9BZI7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 GGT4P-201ENST00000623672 1708 ntBASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC131009.4-201ENST00000624048 1740 ntBASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC073648.2-201ENST00000510116 352 ntBASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC079776.4-201ENST00000511039 504 ntBASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 AC148477.8-201ENST00000624298 468 ntBASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UPF3BQ9BZI7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 AC046158.3-201ENST00000624947 2558 ntBASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 AP002414.3-201ENST00000589352 1468 ntBASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 KRT18P13-201ENST00000400056 1290 ntBASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UPF3BQ9BZI7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms