Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
KRTAP4-3Q9BYR4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 WASH6P-202ENST00000359512 1437 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL512652.2-201ENST00000625156 1716 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL391256.1-201ENST00000443260 1855 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 WRB-204ENST00000398753 699 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC236430.1-201ENST00000402231 743 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL035633.1-201ENST00000406139 838 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC092580.3-201ENST00000430932 139 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM86GP-201ENST00000448322 971 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 IGHV3-62-201ENST00000520057 340 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC069262.1-201ENST00000539058 672 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC025678.2-201ENST00000562061 970 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC051619.7-201ENST00000568314 623 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AP000842.3-202ENST00000569238 1080 ntBASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP4-3Q9BYR4 ALOX12P2-203ENST00000570921 1945 ntBASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 TUBB3P1-201ENST00000405796 1332 ntBASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 AC092364.2-201ENST00000596710 2692 ntBASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC5.65□□□□□ -1.51
KRTAP4-3Q9BYR4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms