Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 NSUN5P1-202ENST00000421140 1535 ntBASIC14.38□□□□□ -0.11
NICN1Q9BSH3 NSUN5P2-203ENST00000457352 1529 ntBASIC14.38□□□□□ -0.11
NICN1Q9BSH3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 RCN1P1-201ENST00000400413 996 ntBASIC14.38□□□□□ -0.11
NICN1Q9BSH3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 LINC00982-205ENST00000420957 435 ntBASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 AP000867.4-201ENST00000641616 219 ntBASIC14.38□□□□□ -0.11
NICN1Q9BSH3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 AL031133.1-201ENST00000406807 723 ntBASIC14.37□□□□□ -0.11
NICN1Q9BSH3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 Z69720.1-201ENST00000601483 472 ntBASIC14.37□□□□□ -0.11
NICN1Q9BSH3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 KRT8P49-201ENST00000604166 1432 ntBASIC14.37□□□□□ -0.11
NICN1Q9BSH3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.37□□□□□ -0.11
NICN1Q9BSH3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NICN1Q9BSH3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms