Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.1■□□□□ 0.65
ARID3AQ99856 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
ARID3AQ99856 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.1■□□□□ 0.65
ARID3AQ99856 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ARID3AQ99856 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ARID3AQ99856 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC19.1■□□□□ 0.65
ARID3AQ99856 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 TCAF2P1-201ENST00000291129 2421 ntBASIC19.1■□□□□ 0.65
ARID3AQ99856 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ARID3AQ99856 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ARID3AQ99856 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.1■□□□□ 0.65
ARID3AQ99856 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ARID3AQ99856 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.09■□□□□ 0.65
ARID3AQ99856 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.09■□□□□ 0.65
ARID3AQ99856 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.09■□□□□ 0.65
ARID3AQ99856 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.09■□□□□ 0.65
ARID3AQ99856 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.09■□□□□ 0.65
ARID3AQ99856 AC010460.3-201ENST00000511359 1579 ntBASIC19.09■□□□□ 0.65
ARID3AQ99856 REXO1L11P-201ENST00000620964 1927 ntBASIC19.09■□□□□ 0.65
ARID3AQ99856 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.09■□□□□ 0.65
ARID3AQ99856 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ARID3AQ99856 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
ARID3AQ99856 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARID3AQ99856 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ARID3AQ99856 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARID3AQ99856 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ARID3AQ99856 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARID3AQ99856 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC19.08■□□□□ 0.65
ARID3AQ99856 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC19.08■□□□□ 0.65
ARID3AQ99856 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ARID3AQ99856 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.08■□□□□ 0.65
ARID3AQ99856 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.08■□□□□ 0.64
ARID3AQ99856 DRAXINP1-201ENST00000437611 948 ntBASIC19.08■□□□□ 0.64
ARID3AQ99856 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.08■□□□□ 0.64
ARID3AQ99856 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
ARID3AQ99856 TOB2P1-201ENST00000469761 992 ntBASIC19.08■□□□□ 0.64
ARID3AQ99856 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.08■□□□□ 0.64
ARID3AQ99856 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
ARID3AQ99856 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.08■□□□□ 0.64
ARID3AQ99856 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.08■□□□□ 0.64
ARID3AQ99856 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ARID3AQ99856 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
ARID3AQ99856 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.08■□□□□ 0.64
ARID3AQ99856 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
ARID3AQ99856 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.08■□□□□ 0.64
ARID3AQ99856 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ARID3AQ99856 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARID3AQ99856 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.07■□□□□ 0.64
ARID3AQ99856 AC233702.3-201ENST00000578656 1387 ntBASIC19.07■□□□□ 0.64
ARID3AQ99856 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARID3AQ99856 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ARID3AQ99856 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ARID3AQ99856 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.07■□□□□ 0.64
ARID3AQ99856 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms