Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC132938.5-201ENST00000624980 1813 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 AC006449.6-201ENST00000612330 2296 ntBASIC13.59□□□□□ -0.23
RAB40CQ96S21 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 RCN1P1-201ENST00000400413 996 ntBASIC13.59□□□□□ -0.23
RAB40CQ96S21 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 ACTG1P4-201ENST00000425123 1122 ntBASIC13.59□□□□□ -0.23
RAB40CQ96S21 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 AC006277.1-201ENST00000624348 1610 ntBASIC13.59□□□□□ -0.23
RAB40CQ96S21 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB40CQ96S21 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB40CQ96S21 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAB40CQ96S21 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
RAB40CQ96S21 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.23
RAB40CQ96S21 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAB40CQ96S21 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAB40CQ96S21 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 HBZP1-201ENST00000354915 429 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 AC104076.2-201ENST00000448912 469 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 HOMER2P1-201ENST00000455653 964 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 AL353801.3-201ENST00000609898 542 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 AC006011.2-201ENST00000621313 1158 ntBASIC13.58□□□□□ -0.24
RAB40CQ96S21 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB40CQ96S21 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
RAB40CQ96S21 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms