Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AP001258.2-201ENST00000529891 490 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AC016629.1-201ENST00000596579 586 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AC091271.1-201ENST00000611877 1162 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AC091046.1-201ENST00000331871 207 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 AC073389.1-201ENST00000595595 795 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SRD5A3P1-201ENST00000603021 949 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 SPCS2P2-201ENST00000603270 608 ntBASIC14.03□□□□□ -0.16
CSMD1Q96PZ7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 AL353732.1-201ENST00000569618 1459 ntBASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 MTND6P24-201ENST00000440466 518 ntBASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.02□□□□□ -0.16
CSMD1Q96PZ7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 TPRX2P-201ENST00000535362 881 ntBASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 PCDH8P1-201ENST00000428983 2773 ntBASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AC006033.1-201ENST00000440505 426 ntBASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 KLF2P4-201ENST00000451959 1225 ntBASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.02□□□□□ -0.17
CSMD1Q96PZ7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 AL353705.2-201ENST00000428243 662 ntBASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
CSMD1Q96PZ7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms