Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 HLA-A-201ENST00000376802 1334 ntBASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 AC006449.5-201ENST00000610658 2098 ntBASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.58■□□□□ 0.08
MS4A4EQ96PG1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 MIR4515-201ENST00000584082 81 ntBASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 AL391005.1-201ENST00000623953 2435 ntBASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 GPAA1P2-202ENST00000606848 1787 ntBASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MS4A4EQ96PG1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 CRYGEP-201ENST00000412192 528 ntBASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MS4A4EQ96PG1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms