Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 AC246785.2-201ENST00000432512 513 ntBASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 AC092647.4-201ENST00000457211 535 ntBASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 TMEM191A-211ENST00000637163 1067 ntBASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
NSMCE2Q96MF7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AL645929.1-201ENST00000420084 975 ntBASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AC005363.2-201ENST00000618631 242 ntBASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NSMCE2Q96MF7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 VENTXP7-201ENST00000475503 772 ntBASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 AC083849.1-201ENST00000615227 514 ntBASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NSMCE2Q96MF7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms