Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AL138918.1-201ENST00000568306 659 ntBASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 AC092183.1-201ENST00000469884 875 ntBASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 AC027307.2-201ENST00000591252 911 ntBASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.63■□□□□ 0.25
ECHDC3Q96DC8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AC023141.5-201ENST00000458585 616 ntBASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AC009093.7-201ENST00000623853 1223 ntBASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ECHDC3Q96DC8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms