Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.38■□□□□ 0.05
HPS1Q92902 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.38■□□□□ 0.05
HPS1Q92902 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.38■□□□□ 0.05
HPS1Q92902 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.38■□□□□ 0.05
HPS1Q92902 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HPS1Q92902 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.37■□□□□ 0.05
HPS1Q92902 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 AC113404.2-201ENST00000507884 177 ntBASIC15.37■□□□□ 0.05
HPS1Q92902 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.37■□□□□ 0.05
HPS1Q92902 AC012615.1-201ENST00000565797 1299 ntBASIC15.37■□□□□ 0.05
HPS1Q92902 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 AC138035.3-201ENST00000622706 2791 ntBASIC15.37■□□□□ 0.05
HPS1Q92902 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
HPS1Q92902 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HPS1Q92902 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HPS1Q92902 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 AC092364.2-201ENST00000596710 2692 ntBASIC15.36■□□□□ 0.05
HPS1Q92902 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 TPSP2-201ENST00000561760 610 ntBASIC15.36■□□□□ 0.05
HPS1Q92902 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 RNF126P1-202ENST00000569893 925 ntBASIC15.36■□□□□ 0.05
HPS1Q92902 AC005332.3-201ENST00000589904 676 ntBASIC15.36■□□□□ 0.05
HPS1Q92902 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.36■□□□□ 0.05
HPS1Q92902 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HPS1Q92902 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.36■□□□□ 0.05
HPS1Q92902 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.36■□□□□ 0.05
HPS1Q92902 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms