Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.92■□□□□ 0.14
TTC9Q92623 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.92■□□□□ 0.14
TTC9Q92623 AC243562.1-201ENST00000560672 389 ntBASIC15.92■□□□□ 0.14
TTC9Q92623 SPDYE22P-201ENST00000582158 798 ntBASIC15.92■□□□□ 0.14
TTC9Q92623 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TTC9Q92623 AL158211.3-201ENST00000607385 239 ntBASIC15.92■□□□□ 0.14
TTC9Q92623 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TTC9Q92623 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC9Q92623 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TTC9Q92623 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC9Q92623 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.92■□□□□ 0.14
TTC9Q92623 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC9Q92623 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.92■□□□□ 0.14
TTC9Q92623 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TTC9Q92623 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 COX5BP8-201ENST00000416911 349 ntBASIC15.91■□□□□ 0.14
TTC9Q92623 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 RBPMS2P1-201ENST00000437762 623 ntBASIC15.91■□□□□ 0.14
TTC9Q92623 AL512638.1-201ENST00000457493 794 ntBASIC15.91■□□□□ 0.14
TTC9Q92623 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC9Q92623 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.91■□□□□ 0.14
TTC9Q92623 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TTC9Q92623 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.91■□□□□ 0.14
TTC9Q92623 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TTC9Q92623 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TTC9Q92623 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 AC140658.5-201ENST00000438532 169 ntBASIC15.9■□□□□ 0.14
TTC9Q92623 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.9■□□□□ 0.14
TTC9Q92623 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 AL662799.1-202ENST00000614205 422 ntBASIC15.9■□□□□ 0.14
TTC9Q92623 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.9■□□□□ 0.14
TTC9Q92623 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TTC9Q92623 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 PCDH8P1-201ENST00000428983 2773 ntBASIC15.9■□□□□ 0.14
TTC9Q92623 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TTC9Q92623 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.9■□□□□ 0.14
TTC9Q92623 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.9■□□□□ 0.14
TTC9Q92623 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TTC9Q92623 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.89■□□□□ 0.13
TTC9Q92623 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TTC9Q92623 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TTC9Q92623 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TTC9Q92623 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 AC008677.1-201ENST00000519230 1561 ntBASIC15.89■□□□□ 0.13
TTC9Q92623 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TTC9Q92623 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms