Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
AP3S1Q92572 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
AP3S1Q92572 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S1Q92572 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AP3S1Q92572 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
AP3S1Q92572 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.76□□□□□ -0.05
AP3S1Q92572 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AP3S1Q92572 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 AC103564.2-201ENST00000432853 1299 ntBASIC14.75□□□□□ -0.05
AP3S1Q92572 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.75□□□□□ -0.05
AP3S1Q92572 AC107956.1-201ENST00000494359 873 ntBASIC14.75□□□□□ -0.05
AP3S1Q92572 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.75□□□□□ -0.05
AP3S1Q92572 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.75□□□□□ -0.05
AP3S1Q92572 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 AL009178.2-201ENST00000597278 2719 ntBASIC14.75□□□□□ -0.05
AP3S1Q92572 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
AP3S1Q92572 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
AP3S1Q92572 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.75□□□□□ -0.05
AP3S1Q92572 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC097637.2-201ENST00000624096 1997 ntBASIC14.74□□□□□ -0.05
AP3S1Q92572 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 UNC93B2-201ENST00000285383 730 ntBASIC14.74□□□□□ -0.05
AP3S1Q92572 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S1Q92572 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC128676.1-201ENST00000454392 318 ntBASIC14.74□□□□□ -0.05
AP3S1Q92572 AP003733.1-201ENST00000491725 852 ntBASIC14.74□□□□□ -0.05
AP3S1Q92572 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.74□□□□□ -0.05
AP3S1Q92572 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.74□□□□□ -0.05
AP3S1Q92572 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S1Q92572 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.74□□□□□ -0.05
AP3S1Q92572 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.74□□□□□ -0.05
AP3S1Q92572 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 PPT1-215ENST00000641471 2368 ntBASIC14.74□□□□□ -0.05
AP3S1Q92572 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.74□□□□□ -0.05
AP3S1Q92572 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
AP3S1Q92572 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
AP3S1Q92572 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP3S1Q92572 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms