Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 ALOX12P2-203ENST00000570921 1945 ntBASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB40AQ8WXH6 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 AC132008.2-207ENST00000454517 770 ntBASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 HLA-J-202ENST00000469281 1241 ntBASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 AL160237.2-201ENST00000556165 472 ntBASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 AL031008.1-201ENST00000619963 541 ntBASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB40AQ8WXH6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AKR1C7P-201ENST00000305623 895 ntBASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 KRT8P10-201ENST00000450021 1447 ntBASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB40AQ8WXH6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms