Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 AC006486.2-201ENST00000624246 2199 ntBASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 AC132938.5-201ENST00000624980 1813 ntBASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 MIR4785-201ENST00000585005 73 ntBASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 SSR4P1-203ENST00000599569 2260 ntBASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 MIR662-201ENST00000384847 95 ntBASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 POU5F1P6-201ENST00000466990 990 ntBASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 AC141257.4-201ENST00000634557 245 ntBASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 AC136944.6-201ENST00000634818 245 ntBASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 NFIC-211ENST00000641145 8399 ntBASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SMIM4Q8WVI0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SMIM4Q8WVI0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms