Protein–RNA interactions for Protein: Q8TDC3

BRSK1, Serine/threonine-protein kinase BRSK1, humanhuman

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRSK1Q8TDC3 MIR3909-201ENST00000579518 119 ntBASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 ME2P1-201ENST00000426028 1970 ntBASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BRSK1Q8TDC3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 RNU1-129P-201ENST00000384064 167 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 MIR940-201ENST00000401276 94 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 PMS2P4-201ENST00000412466 1052 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 KRT18P2-201ENST00000447938 1258 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AC040169.1-201ENST00000565382 521 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 U1.21-201ENST00000580816 167 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 AC004877.2-201ENST00000623941 599 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 GPAA1P2-202ENST00000606848 1787 ntBASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BRSK1Q8TDC3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 AL671883.3-201ENST00000603274 991 ntBASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BRSK1Q8TDC3 AC025580.3-201ENST00000617932 1424 ntBASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BRSK1Q8TDC3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms