Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 AC104640.1-201ENST00000562617 2109 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 AC079328.2-201ENST00000561241 3354 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 ARMC10P1-201ENST00000313754 855 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 ATP5G1P1-201ENST00000448724 379 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 HOMER2P1-201ENST00000455653 964 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 VENTXP5-201ENST00000523979 775 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 AC002310.6-201ENST00000624451 1377 ntBASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAB3IL1Q8TBN0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 BX664615.1-201ENST00000443558 458 ntBASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 YBX1P2-201ENST00000489612 999 ntBASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 AL596087.1-201ENST00000400979 1969 ntBASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.71■□□□□ 0.27
RAB3IL1Q8TBN0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAB3IL1Q8TBN0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC132872.4-202ENST00000622924 2756 ntBASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAB3IL1Q8TBN0 AP002414.1-201ENST00000391405 1147 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms