Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
TTC16Q8NEE8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC16Q8NEE8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TTC16Q8NEE8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TTC16Q8NEE8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 AC023141.5-201ENST00000458585 616 ntBASIC17.54■□□□□ 0.4
TTC16Q8NEE8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 AC005412.3-201ENST00000580309 715 ntBASIC17.54■□□□□ 0.4
TTC16Q8NEE8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 LINC00628-201ENST00000628516 1289 ntBASIC17.54■□□□□ 0.4
TTC16Q8NEE8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.54■□□□□ 0.4
TTC16Q8NEE8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AC109322.1-201ENST00000524499 1264 ntBASIC17.53■□□□□ 0.4
TTC16Q8NEE8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AL135744.1-201ENST00000565098 629 ntBASIC17.53■□□□□ 0.4
TTC16Q8NEE8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 AC063926.3-201ENST00000624734 5658 ntBASIC17.53■□□□□ 0.4
TTC16Q8NEE8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TTC16Q8NEE8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 TFAMP1-201ENST00000412727 736 ntBASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
TTC16Q8NEE8 AC079140.1-201ENST00000508039 487 ntBASIC17.52■□□□□ 0.4
TTC16Q8NEE8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms