Protein–RNA interactions for Protein: Q8N9R0

LINC00304, Putative uncharacterized protein encoded by LINC00304, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00304Q8N9R0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 AC092865.6-201ENST00000642101 219 ntBASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 AC131009.4-201ENST00000624048 1740 ntBASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 AL121761.2-201ENST00000598007 1648 ntBASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LINC00304Q8N9R0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AC092053.1-201ENST00000605787 1936 ntBASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AC012313.1-201ENST00000593393 3059 ntBASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AC002056.1-201ENST00000395613 760 ntBASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 DDT-204ENST00000404092 805 ntTSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FAM58CP-201ENST00000435741 640 ntBASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LINC00304Q8N9R0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms