Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH20Q8N6Y1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AC134684.3-201ENST00000641758 218 ntBASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AC092902.6-201ENST00000641783 218 ntBASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AC079781.4-201ENST00000641908 219 ntBASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH20Q8N6Y1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 AC092068.3-201ENST00000587894 2016 ntBASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 AP006288.1-201ENST00000446065 395 ntBASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 CEND1P1-201ENST00000451006 455 ntBASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH20Q8N6Y1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH20Q8N6Y1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms