Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 POM121L3P-201ENST00000419331 1163 ntBASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 KRT16P4-201ENST00000453883 522 ntBASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.62■□□□□ 0.09
DEPDC4Q8N2C3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 TSPY19P-201ENST00000418461 509 ntBASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 TSPY18P-201ENST00000441642 509 ntBASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 RN7SL510P-201ENST00000581311 263 ntBASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 NSUN5P1-202ENST00000421140 1535 ntBASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 NSUN5P2-203ENST00000457352 1529 ntBASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DEPDC4Q8N2C3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms