Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 TOP3BP1-201ENST00000420768 1380 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 AL513477.1-201ENST00000602865 2407 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 AL353705.2-201ENST00000428243 662 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 AC011495.1-201ENST00000498085 584 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.06■□□□□ 0.32
SIX5Q8N196 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 AC104794.3-201ENST00000566840 1248 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 AL606495.2-201ENST00000605867 535 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 AL589739.1-201ENST00000607720 493 ntBASIC17.06■□□□□ 0.32
SIX5Q8N196 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SIX5Q8N196 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.06■□□□□ 0.32
SIX5Q8N196 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SIX5Q8N196 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 AL138781.2-201ENST00000617896 1843 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.05■□□□□ 0.32
SIX5Q8N196 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.05■□□□□ 0.32
SIX5Q8N196 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 AC079776.1-201ENST00000401540 1152 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.05■□□□□ 0.32
SIX5Q8N196 DFFBP1-201ENST00000433250 979 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.05■□□□□ 0.32
SIX5Q8N196 AC135586.1-201ENST00000539323 574 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 KRT17P8-201ENST00000540749 863 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.05■□□□□ 0.32
SIX5Q8N196 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.05■□□□□ 0.32
SIX5Q8N196 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SIX5Q8N196 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 LYSMD4-203ENST00000378904 2122 ntBASIC17.05■□□□□ 0.32
SIX5Q8N196 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SIX5Q8N196 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.05■□□□□ 0.32
SIX5Q8N196 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.04■□□□□ 0.32
SIX5Q8N196 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SIX5Q8N196 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SIX5Q8N196 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SIX5Q8N196 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.04■□□□□ 0.32
SIX5Q8N196 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SIX5Q8N196 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 HLA-H-201ENST00000383620 1096 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIX5Q8N196 AC087499.6-201ENST00000411576 835 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 RPL37AP1-201ENST00000412502 279 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 AC112492.5-201ENST00000421897 457 ntBASIC17.04■□□□□ 0.32
SIX5Q8N196 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms