Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
COL27A1Q8IZC6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 AC234783.1-201ENST00000441761 496 ntBASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 SDHAP3-202ENST00000515467 728 ntBASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 AP005482.1-201ENST00000563722 1273 ntBASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 TMEM261P1-201ENST00000604899 340 ntBASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 AC141586.5-201ENST00000624546 2050 ntBASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
COL27A1Q8IZC6 GGT3P-204ENST00000453783 1664 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AC022210.1-201ENST00000449856 793 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AL139010.1-201ENST00000454878 894 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AL391256.1-201ENST00000443260 1855 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AC245100.5-201ENST00000452108 331 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 AL365330.1-201ENST00000607459 531 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 MIR6069-201ENST00000620069 79 ntBASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
COL27A1Q8IZC6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 CROCCP4-201ENST00000457096 498 ntBASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 AC011495.1-201ENST00000498085 584 ntBASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.41■□□□□ 0.06
COL27A1Q8IZC6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms