Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 YBX2P1-201ENST00000394192 760 ntBASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 AC092474.2-201ENST00000424288 719 ntBASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SCUBE3Q8IX30 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 AC027796.2-201ENST00000575326 344 ntBASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 MTDHP5-201ENST00000598980 586 ntBASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 ALOX12P2-203ENST00000570921 1945 ntBASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SCUBE3Q8IX30 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SCUBE3Q8IX30 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 AC055717.3-201ENST00000622967 595 ntBASIC17.51■□□□□ 0.39
SCUBE3Q8IX30 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms